@RSaw-Knack
Is your data disk in a Storage Pool? If so, you'll have to put your disk into maintenance mode, re-run the sequence version encryption script, and take your disk off maintenance mode.
If you're still having issues encrypting your SQL VM, we can look into your logs if you'd like to send the information below.
Email: AzCommunity@microsoft.com
Subject: ATTN Derek & James - ADE
Body:
-Link to this thread.
-Subscription ID
-Screenshot of your disk management
Attach the following logs as a zip file:
C:\WindowsAzure\Logs\Plugins\Microsoft.Azure.Security.AzureDiskEncryption\BitLockerExtension.txt
C:\Packages\Plugins\Microsoft.Azure.Security.AzureDiskEncryption\RuntimeSettings
C:\Windows\System32\winevt\Logs\Microsoft-Windows-BitLocker%4BitLocker Management.evtx
C:\Windows\System32\winevt\Logs\Microsoft-Windows-BitLocker-DrivePreparationTool%4Operational.evtx
If you have any other questions just let us know!
Thank you for your time and patience.